Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDNNEKEKSKSELLVVTGLSGAGKSLVIQCLE-----DMGYFCVDNLPPVLLPKFVELMEQGNPSLRKVAIAIDLRGKELFNSLVAVVDKVKSESDVI-IDVM--FL-EASTEKLISRYKE------TRRAHPLMEQGKR--SLINAINDEREHLSQIRSIANFVID--TTKLSPKELKERIRRYYEDEEFETFTINVTSFGFKHGIQMDADLVFDVRFLPNPYYVVDLRPLTGLDKDVYNYVMKWKETEIFFEKLTDLLDFMIPGYKKEGKSQLVIAIGCTGGQHRSVALAERLGNYLNEVFEYNVYVHHRDAHIESGEKK |
| 3NH6 Chain:A ((70-262)) | LQDVSFTVMPGQTLALVGPSGAGKSTILRLLFRFYDISSGCIRIDGQDISQVTQA--------SLRSHIGVVPQDTV--LFND--TIADNIRYGRVTAGNDEVEAAAQAAGIHDAIMAFPEGYRTQVGERGLKLSGGEKQRVAIARTILKAPGII---------LLDEATSALDTSN-ERAIQASLAKVC-ANRTTIVVAHRLS--TVVNADQILVIK-------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NH6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14649 for 1186 contacts (-12.4/contact) +
2D Compatibility (PS) -18490 + (NN) -2833 + (LL) 9080
1D Compatibility (HY) -2400 + (ID) 1550
Total energy: -30842.0 ( -26.01 by residue)
QMean score : 0.290
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