Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTHVEVVATIAPQLSIEETLIQKINHRIDAIDVLELRIDQIENVTVDQVAEMITKLKVMQDSFK---LLVTYRTKLQGGYGQFINDLYLNLISDLANINGIDMIDIE-WQADIDIEKHQRIIKHLQQYNKEVVISHHNFESTPPLDELQFIFFKMQKFNPEYVKLAVMPHNKNDVLNLLQA-MSTFSDTMDCKVVGISMSKLGLISRTAQGVFGGALTYGCIGEPQAPGQIDVTDLKAQVTLY
1L9W Chain:C ((33-244))
---------------------EALAYREATFDILEWRVDHFMDIASTQ--SVLTAARVIRDAMPDIPLLFTFRSAKEGGEQTITTQHYLTLNRAAIDSGLVDMIDLELFTGDADVKA---TVDYAHAHNVYVVMSNHDFHQTPSAEEMVSRLRKMQALGADIPKIAVMPQSKHDVLTLLTATLEMQQHYADRPVITMSMAKEGVISRLAGEVFGSAATFGAVKQASAPGQIAVNDLRS-----
General information:
TITO was launched using:
RESULT:
Template:
1L9W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103288 for 1633 contacts (-63.3/contact) +
2D Compatibility (PS) -22269 + (NN) -11911 + (LL) 3732
1D Compatibility (HY) -13200 + (ID) 3700
Total energy: -150636.0 ( -92.24 by residue)
QMean score : 0.465
(partial model without unconserved sides chains):
PDB file :
Tito_1L9W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L9W-query.scw
PDB file :
Tito_Scwrl_1L9W.pdb
: