Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTNSSKSFTKFMAASAVFTMGFLSVPTAGAEQTNQIANKPQAIQWHTNLTNERFTTIAHRGASGYAPEHTFQAYDKSHNELKASYIEIDLQRTKDGHLVAMHDETVNRTTNGHGKVEDYTLDELKQLDAGSWFNKKYPKYARASYKNAKVPTLDEILERYGPN-ANYYIETKSPDVY-PGMEEQLLASLKKHHLLNNNKLKNGHVMIQSFSDESLKKIHRQNKHVPLVKLVDKGELQQFNDQRLKEIRSYAIGLGPDYTDLTEQNTHHLKDLGFIVHPYTVNEKADMLRLNKYGVDGVFTNFADKYKEVIK |
2PZ0 Chain:A ((11-249)) | ----------------------------------------------------KTLVIAHRGDSKNVPENTIAAFKRA-MELGADGIELDVQLTKDGHLVVIHDETVDRTTNGEGFVKDFTLEEIKKLDAGIKFG--------EKFAGERIPTLYEVFELIGDKDFLVNIEIKSGIVLYPGIEEKLIKAIKEYNFEER-------VIISSFNHYSLRDVKKMAPHLKIGLLYQCGLVEPWH-MAL-RM--EAYSLHPFYFNIIPELVEGCKKNGVKLFPWTVDRKEDMERMIKAGVDGIITDDPETLINLVR |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PZ0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61501 for 2037 contacts (-30.2/contact) +
2D Compatibility (PS) -26180 + (NN) -15774 + (LL) 4184
1D Compatibility (HY) -20000 + (ID) 4600
Total energy: -123871.0 ( -60.81 by residue)
QMean score : 0.520
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