Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRQARPEDRFDIAKLVYMVWDD-MELELVKHLPKDMVLDAIEKSCVDATYRTFYQHILVYEVENKVAGCIISYSGENELKYEKAWELLDLPEEIKQYGTPLPVKEAKDDEYYIETIATFAAYRGRGIATKLLTSLLES---NTHVKWSLNCDINNEAALKLYKKVGFISDGQIELYKHMYHHLIVK
1Z4E Chain:A ((6-148))
TIREATEGDLEQMVHMLADDVLGRKRERYEKPLPV-SYVRAFKEIKKD-----KNNELIVACNGEEIVGMLQVTFTPYLT-------------------------YQGSWRATIEGVRTHSAARGQGIGSQLVCWAIERAKERGCHLIQLTTDKQRPDALRFYEQLGFKASHEG-------------
General information:
TITO was launched using:
RESULT:
Template:
1Z4E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93602 for 939 contacts (-99.7/contact) +
2D Compatibility (PS) -14459 + (NN) -3824 + (LL) 3628
1D Compatibility (HY) -400 + (ID) 1400
Total energy: -110057.0 ( -117.21 by residue)
QMean score : 0.442
(partial model without unconserved sides chains):
PDB file :
Tito_1Z4E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z4E-query.scw
PDB file :
Tito_Scwrl_1Z4E.pdb
: