Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNHLLSMEHLSTDQIYKLIQKASQFK---SGERQLPNFEGKYVANLFFENSTRTKCSFEMAELKLGLKTISF-ETSTSSVSKGESLYDTCKTLESIGCDLLVIRHPFNNYYEKLAN--INIPIANAGDGSGQHPTQSLLDLMTIYEEYGYFEGLNVLICGDIKNSRVARSNYHSLKALGANV--MFNSPNAW-----IDDSLEAPYVNIDD------VIETVDIVMLLRIQHERHGLAEETRFAADDYHQKHGLNEVRYNKLQ-EHAIVMHPAPVNRGVEIQSDLVEASKSRIFKQMENGVYLRMAVIDELLK |
| 2RGW Chain:C ((1-301)) | MKHLISMKDIGKEEILEILDEARKMEELLNTKRPLKLLEGKILATVFYEPSTRTRLSFETAMKRLGGEVITMTDLKSSSVAKGESLIDTIRVISGY-ADIIVLRHPSEGA-ARLASEYSQVPIINAG----QHPTQTLLDLYTIMREIGRIDGIKIAFVGDLKYGRTVHSLVYAL-SLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKESLDDLDDDIDVLYVTRIQKERFP-------DPNEYEKVKGSYKIKREYVEGKKFIIMHPLP--RVDEIDYDVDDLPQAKYFKQSFYGIPVRMAILKKLIE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RGW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -157236 for 2203 contacts (-71.4/contact) +
2D Compatibility (PS) -29838 + (NN) -7890 + (LL) 460
1D Compatibility (HY) -25600 + (ID) 5100
Total energy: -225204.0 ( -102.23 by residue)
QMean score : 0.494
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