Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLIKKKNKDIRIIPLGGVGEIAKNMYIVEVDDEMFMLDAGLMFPEDEMLGIDIVIPDISYVLE-----NKDKLKGIFLTHGHEHAIGAVSYVLEQLDAPVYGSKLTIALIKENMKARNIDKKVRYYTVNNDSIMRFKNVNISFFNTTHSIPDSLGVCIHTSYG-AIVYTGEFKFDQSLHGHYAPDIKRMAEIGEEGVFVLISDSTEAEKPGYNTP--ENVIEHHMYDAFAKVR--GRLIVSCYASNFIRIQQVLNIASKLNRKVSFLGRSLESSFNIARKMGYFDIPKDLLIPITEVDNYPKNEVIIIATGMQGEPVEALSQMAQHKHKIMNIEEGDSVFLAITASANMEVIIANTLNELVRAGAHIIPNNK------KIHASSHGCMEELKMMINIMKPEYFIPV------QGEFKMQIAHAKLAAEAGVAPEKIFLVEKGDVINYNGKDMILNEKVNSGNILIDGIGIGDVGNIVLRDRHLLAEDGIFIAVVTLDPKNRRIAAGPEIQSRGFVYVRESEDLLREAEEKVREIVEAGLQEKRIEWSEIKQNMRDQISKLLFESTKRRPMIIPVISEI |
| 5AHR Chain:A ((1-343)) | ----------------------------------------------SMTCPFYKKIPGTGFTVDAFQYGVVEGCTAYFLTHFHSDHYAGLS---KHFTFPVYCSEITGNLLKNKLHVQ----EQYIHPLPLDTECIVNGVKVVLLDANHC-PGAVMILFYLPNGTVILHTGDFRADPSMER---------SLLADQKVHMLYLDTTYC-SPEYTFPSQQEVIRFAINTAFEAVTLNPHALVVCGTYSIGKEKVFLAIADVLGSKVGMS----QEKYKTLQCLNIPEINS------------------LITTDMCSSLVHLLPMMQINFKGLQSHLKK----------------CGGKYNQILAFRPTVIPQTKGNISIYGIPYSEHSSYLEMKRFVQWLKPQKIIPTVNVGTWKSRSTMEKYFREWKLEAGY--------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 5AHR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -192647 for 2390 contacts (-80.6/contact) +
2D Compatibility (PS) -33100 + (NN) -10284 + (LL) 19136
1D Compatibility (HY) -22000 + (ID) 3500
Total energy: -242395.0 ( -101.42 by residue)
QMean score : 0.484
|
|
|