Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------MIRLGKMSDLDQILNLVEEAKELMKEHDNEQWD-DQYPLLEHFEEDIAKD--YLYVLEENDKIYGFIVVDQDQAEWYDDIDWPVNREGAFVIHRLTGSKEYKG---AATELFNYVI-DVVKARGAEVILTDTFALNKPAQGLFAKFGFHKVGEQLMEYPPYDKGEPFYAYYKNLKE
2Q7B Chain:A ((17-180))
FQGMEIKEYENNPYHLAQLVDLINYCQNI---EAKLDIKMAEQDDIFQIENYYQNRKGQFWIALENEKVVGSIALLR-------------IDDKTAVLKKFFTYPKYRGNPVRLGRKLFERFMLFARASKFTRIVLDTPEKEKRSHFFYENQGFKQITRDELDVDYIFPDRDSRIYVKLL--
General information:
TITO was launched using:
RESULT:
Template:
2Q7B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74609 for 1064 contacts (-70.1/contact) +
2D Compatibility (PS) -16578 + (NN) -9877 + (LL) 1268
1D Compatibility (HY) -5600 + (ID) 1100
Total energy: -106496.0 ( -100.09 by residue)
QMean score : 0.551
(partial model without unconserved sides chains):
PDB file :
Tito_2Q7B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Q7B-query.scw
PDB file :
Tito_Scwrl_2Q7B.pdb
: