Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNLPMNKLIDEVNNELSVAINKSVM-----DTQLEESM-LYSLNAGGKRIRPVLLLLTLDSLNTEYELGVKSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISSDDRLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLTFAVMSAADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAKLGKKVGSDLENNKSTYVSLLG-KDGAEDKLTYHRDAAVDELTQIDEQFNTKHLLEIVDLFYSRDH |
| 3WJO Chain:A ((20-285)) | ---------INELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGSL------KVLEVMSEAVNVIAE--GEVLQLMN--------NYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNA--------VGDDLNEGKPTLPLLHAMHHGTPEQAQMIRTAI--------EQGNGRHLLEPV-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WJO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -58933 for 1880 contacts (-31.3/contact) +
2D Compatibility (PS) -26226 + (NN) -14887 + (LL) 2896
1D Compatibility (HY) -14800 + (ID) 4150
Total energy: -116100.0 ( -61.76 by residue)
QMean score : 0.394
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