Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------MNIRHIRNATAVIEYGGKRILIDPMLSDKGSFDPFPNSPRQDQKNPLVELPMAIEDIINDIDLVILTHLHIDHFDPKAIEVLPKDIKIYAQNEEDASEVERYGFTN-VSVFNDVTHIGEIELIKTDAQHGHG------EILKMTGHVHGMI-LKHSEEPTLYLAADTVWFEGVEKALKTYQPDVVVLNGG-ANQFFEGGPLVM-DEHDVLKVANTLPLAQIVVVHMEAVNHWHLSRKELNEFINSNDLGNRVVVPNDGELLTFEK |
| 1ZKP Chain:A ((18-268)) | LYFQSNAMKMTVVGFWGGFPEAGEATSGYLFEHDGFRLLVD---CGSGVLAQLQKYITPSD-----------------IDAVVLSHYHHDHV--ADIGVLQYARLITSATKGQLPELPIYGHTFDENGFHSLTHEPHTKGIPYNPEETLQIGPFSISFLKTVHPVTCFAMRITAGNDIVVYSADSSYIPEFIPFTK--DADLFICECNMYAHQ-EAAKAGHMNSTEVASIAKDANVKELLLTHLPHTGNPADLVTEAK-----QIFSGHITLAHSG--YVWNS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZKP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -83022 for 1790 contacts (-46.4/contact) +
2D Compatibility (PS) -23172 + (NN) -1880 + (LL) 2104
1D Compatibility (HY) -7600 + (ID) 1950
Total energy: -115520.0 ( -64.54 by residue)
QMean score : 0.388
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