Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------MIQIHHANAFEIIKDFHQQNLKVDAIITDPPYNISVKNNFSTLKSAKRQGIDFGEWDKNFKLLEWIARYASLINPNGCMVIFCSYRFIS-----------YIADFLEENGFVVKDFIQWVKNNPMPRNIHRRYVQ------DTEFALWAVKK------KAKWVFNKPKNEKYLRPLILKSPVVSGIERV---KHPTQKSLTLMEKIISTHTNPNDTVLDPFMGSGTTGLACKNLKRNFIGIESEKEYFQIAQKRLS--------------------------- |
| 1BOO Chain:A ((3-322)) | NFGKKPAYTTSNGSMYIGDSLELLESFPEE--SISLVMTSPPFALQRKKEYGNL----------EQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGAYMKGVPARSIYNFRVLIRMIDEVGFFLAEDFYWFNPSKLPSPIEWVNKRKIRVKDAVNTVWWFSKTEWPKSDITKVLASIPPNLLQISNSESNGQYLANCKLMGIKAHPARFPAKLPEFFIRMLTEPDDLVVDIFGGSNTTGLVAERESRKWISFEMKPEYVAASAFRFLDNNISEEKITDIYNRILNGESLDLNSI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BOO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81346 for 1678 contacts (-48.5/contact) +
2D Compatibility (PS) -23377 + (NN) -8496 + (LL) 648
1D Compatibility (HY) -12400 + (ID) 2250
Total energy: -127221.0 ( -75.82 by residue)
QMean score : 0.322
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