Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------MAKENLPIVFGPVLSRRFGKSLGVDLSPSKKQCNYNCIYCELGKAKPIERMEEVIKVETLISTIQNALNNLTTP-IDVLTITA--------NGEPTLYPHLLELIQSIKPFLKGVKTLILSNGSLFYEPKVQQALKEFDIVKFSLDAIDLKAFERVDKPYSKDINKILEGILSFSQIYQGQLVAEVLLIKGVND-------------SANNLKLIADFLKKINTARVDLSTIDRPSSFKAPKLSEDELLKCSLFFEGLCVSLPKRSTAQAKKLVSCGIDELLALISRRPLS-AEEAPLILDPNAFKHLETLLNHKQITIKKVGSLEFYCAF |
| 4B46 Chain:A ((1-367)) | MKLAMIGFGQAGGKVVDKFVEYDRERNAGIVRAAVAVNSAKADLLGLKNIPKDQRVLIGQSRVKGHGVGADNELGAEIAEED-IDEVQGAIDSIPVHEVDAFLVVSGLGGGTGSGGAPVLAKHLKRIYT---EPVYGLGILPGSDEGGIYTLNAARSFQTFVREVDNLLVFDNDAWRKTGESVQGGYDEINEEIVNRFGVLFGSVVDSSEIINTLAGGGVSTVGYASEGVTAHTTNRITSLVRKAALGRLTLP------------CEIEGAERALLVLAGPPEHLNRKGIERGRKWIEEQTGSMEVRGGDYPIPGAEKVAGVILLSGVTNVPRIKELQQVAIEAQD-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4B46.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -42416 for 2208 contacts (-19.2/contact) +
2D Compatibility (PS) -29488 + (NN) -2468 + (LL) 1572
1D Compatibility (HY) -6000 + (ID) 2100
Total energy: -80900.0 ( -36.64 by residue)
QMean score : 0.268
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