Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKQTTINHSVELVGIGLHKGVPVKLVLEPLEENQGIVFYRSDLGVKLPLKPENIVDTKMATVLGKDNARISTIEHLLSAVHAYGIDNLKISVDNEEIPIMDGSALTYCMLLDEAGI---KELDAPKKVMEIKQAVEVREGDKFVKIEPDSQLSLNFTIDFNHPVIAKQAHHFVFSKTAYKEQVAKARTFGFLQEVNYLRSIGLAKGGSLNNCIVLDENSILNKEGLRCEKEFVCHKILDAMGDLMVLGMPVMGKYTSFSGSHKLNSMLVKAILADAKNYEVLIASDPAKEFALQKAFA |
4U3D Chain:A ((4-268)) | --EKTVKEKLSFEGVGIHTGEYSKLIIHPEKEGTGIRFFKN--GVYIPARHEFVVHTNHSTDLGFKGQRIKTVEHILSVLHLLEITNVTIEVIGNEIPILDGSGWEFYEAIRKNILNQNREID----YFVVEEPIIVEDEGRLIKAEPSDTLEVTYEGEFKN-FLGRQKFTFV---EGNEEEIVLARTFAFDWEIEHIKKVGLGKGGSLKNTLVLGKDKVYNPEGLRYENEPVRHKVFDLIGDLYLLGSPVKGKFYSFRGGHSLNVKLVKELAKKQK--------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4U3D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -170038 for 2257 contacts (-75.3/contact) +
2D Compatibility (PS) -27804 + (NN) -4734 + (LL) 2488
1D Compatibility (HY) -23200 + (ID) 4900
Total energy: -228188.0 ( -101.10 by residue)
QMean score : 0.454
|
|
|