Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRCRVYYEDTDSEGVVYHANYLKYCERARSEFFFKQNV-L----PENEE-GVFVIRSIKADFFTPASLGQVLEIRTQIKELRKVFVVLFQEIYCIQNASLEPMKPFKVFASEIKFGFV--NRSTYSPIAIPKLFKELLSAV
1LO7 Chain:A ((8-141))
-QQRIEFGDCDPAGIVWYPNYHRWLDAASRNYFIKCGLPPWRQTVVERGIVGTPIVSCNASFVCTASYDDVLTIETCIKEWRRKSFVQRHSVSRTTPG----GDVQLVMRADEIRVFAMNDGERLRAIEVPADYIELCS--
General information:
TITO was launched using:
RESULT:
Template:
1LO7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94718 for 834 contacts (-113.6/contact) +
2D Compatibility (PS) -13464 + (NN) 1787 + (LL) 656
1D Compatibility (HY) -5600 + (ID) 1600
Total energy: -112939.0 ( -135.42 by residue)
QMean score : 0.418
(partial model without unconserved sides chains):
PDB file :
Tito_1LO7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1LO7-query.scw
PDB file :
Tito_Scwrl_1LO7.pdb
: