Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNGLEEKGYKAAVIKFDAASESDFVEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIENNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDELKADYVKNIPLNRLGSAKEVAEAVAFLLSDHSSYITGETLKVNGGLYM
4BO9 Chain:D ((23-268))
MSLQGKVALVTGASRGIGQAIALELGRLG-AVVIGTATSASGAEKIAETLKANGVEGAGLVLDVSSDESVAATLEHIQQHLGQPLIVVNN------------KDDEWFDVVNTNLNSLYRLSKAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAITVNAVAPGFIDTDMTRELPEAQREALLGQIPLGRLGQAEEIAKVVGFLASDGAAYVTGATVPVNGGMYM
General information:
TITO was launched using:
RESULT:
Template:
4BO9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -99596 for 1976 contacts (-50.4/contact) +
2D Compatibility (PS) -25714 + (NN) -10540 + (LL) 1416
1D Compatibility (HY) -18400 + (ID) 4550
Total energy: -157384.0 ( -79.65 by residue)
QMean score : 0.647
(partial model without unconserved sides chains):
PDB file :
Tito_4BO9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4BO9-query.scw
PDB file :
Tito_Scwrl_4BO9.pdb
: