Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLFAMIGSGGFIAPK-HLQAIRDT-GHFLDCSFDVHDSVGVLDEYFPQSEFFTNIEDFEKHLEQSKAMGKEINYLSVCTPTHTHFDHIRFGLRNGMHVICEKPLVLDPSEIQELKDLEVKYQKRVFSLLPLRLHCDTLALKEKIKSELDKNPEKVFDITLTYISVQGKWYFSSWRADVNRSGGLATQMGVNIFDTLLYLFGGVKDKVIN-------REEPDCVCGILFLEHAKIRWFFSINPEHMGV--AKEKVYHKMILE-----------GE-------------------------E---VNLTQSFDNLYIESYKQILAQGGF--GLDDAAASIKLAYELRNLSLSEPNDDSHALCCKNKTDQ |
| 3KUX Chain:A ((8-348)) | IKVGLLGYG-YASKTFHAPLIMGTPGLELAGVSSSDASKVH-AD-WPAIPVVSDPQMLFN--------DPSIDLIVIPTPNDTHFPLAQSALAAGKHVVVDKPFTVTLSQANALKEHADDAGLLLSVFHNRRWDSDFLTLKTLLAEGSL---GNVVYFESHFDRYRPE-IRQRWREQ---GGGIWYDLGPHLLDQALQLFGLPETLNVDLGMLRPGSQSVDYFHAVLSYPGQRVVLHSTVLAAAETARYIVHGTQGSYIKFGVDPQEDRLKAGERLPQADWGYDMRDGIVTLSHDNVLTEKPLLTLPGNYPAYYAGIRDAIWGTAPNPVPATEAIKVMELIELGIASDQQKKALPIIAKN------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KUX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -137562 for 2246 contacts (-61.2/contact) +
2D Compatibility (PS) -30668 + (NN) -7632 + (LL) 1600
1D Compatibility (HY) -5600 + (ID) 2550
Total energy: -182412.0 ( -81.22 by residue)
QMean score : 0.391
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