Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDFKNKKWLFLAPLAGYTDLPFRSVVKKFGVDVTT-SEMVSSHSLVYAFDKTSKMLEKSPLEDHFMAQISGSKESVVKEAVEKINALDHVSGIDFNCGCPAPKVANHGNGSGLLKDLNHLVEILKVIRENTNKKITSVKVRLGFEK----KIPKEIAHALNDAPVDYVVVHGRTRSDRYQKDKIDYESIALMKKILKK-PVIANGEIDSVKKAFEVLQITQADGLMIGRATLRAPWIFWQIRNNTTELPAVVKKDLVLEHFDKMVEFYGDRGVIMFRKNLHAYAKGEMQASAFRNCVNTLTEIKSMRESIEEFFNQEMLQSEVPLWVELNQKSV |
3B0P Chain:A ((2-318)) | LDPR----LSVAPMVDRTDRHFRFLVRQVSLGVRLYTEMTVDQAVLR--GNRERLLAFRPEEHPIALQLAGSDPKSLAEAARIGEAFGY-DEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVT-VKMRLGLEGKETYRGLAQSVEAMAEAGVKVFVVHAR----SALIPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLK--RVDGVMLGRAVYEDPFVLEEADRRVFGLPRRPSRLEVARRMRAYLEEEVLKGTPPWAVLRH-----------MLNLFRGRPKGRLWRRLLSEGRSLQALDRALRLMEEEVGE-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B0P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -155089 for 2545 contacts (-60.9/contact) +
2D Compatibility (PS) -32365 + (NN) -15857 + (LL) 2076
1D Compatibility (HY) -13200 + (ID) 3900
Total energy: -218335.0 ( -85.79 by residue)
QMean score : 0.378
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