Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------MLVDSFNRVIDYIRVSVTKQCNFRCQYCMPTTPLDFFDDEELLPLDNVLEFLKIAIDE----GVKKIRITGGEPLL--RKGLDEFIAKLHA---YNKEVALVLSTNGFSL-KKMAKGLKDAGLSRVNVSLDSLKSDRVLKISQKDALKNTLEGIEESLKVGLKLKLNTVVMKGV---NDDEILELLEYAKN---RSIQIRYI-------EFMENTHAKSLVKGLKEKEILDLIAQKYKIMGMEK--PKQGSSKIYTLENGYQFGIIAPHSDDFCQSCNRIRLA----SDGKICPCLY--------YQDAIDA------KEAIINKDTKMMKRLLKQSIINKPEKNMWNDKNGGTPTRAFYYTGG---------------------------------------- |
| 1OLT Chain:A ((4-444)) | QQIDWDLALIKYYTSYPTALEFSEDFGEQAFLQAVARYPERPLSLYVHIPFCHK---LCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRHVSQLHWGGGTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFT-STNIDLIYGLPKQTPESFAFTLKRVAELNPDRLSVFNYAHLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDCYAQNQKELKQYYQQVDEQGNALWRGIALTRDDCIRRDVIKSLICNFRLDYSPIEQQWDLLFADYFAEDLKLLAPLAKDGLVDVDEKGIQVTAKGRLLIRNICMCFDTYL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1OLT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -49574 for 2324 contacts (-21.3/contact) +
2D Compatibility (PS) -33824 + (NN) -13245 + (LL) 284
1D Compatibility (HY) -7600 + (ID) 1650
Total energy: -105609.0 ( -45.44 by residue)
QMean score : 0.281
|
|
|