Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQTIHIGVLSASDRASKGVYEDLSGKAIQEVLSEYLLN--PLEFHYEIVADERDLIEKSLIKMCDEYQCDLVVTTGGTGPALRDITPEATKKVCQKMLPGFGELMRMTSLKYVPTAILSRQSAGIRNKSLIINLPGKPKSIRECLEAV--------FPAI----PYCVDLILGNYMQVNEKNIQAFRPKQ
1DI6 Chain:A ((2-187))
-ATLRIGLVSISDR-------DKGIPALEEWLTSALTTPFE--LETRLIPDEQAIIEQTLCELVDEMSCHLVLTTGGTGPARRDVTPDATLAVADREMPGFGEQMRQISLHFVPTAILSRQVGVIRKQALILNLPGQPKSIKETLEGVKDAEGNVVVHGIFASVPYCIQLLEGPYVETAPEVVAAFRPKS
General information:
TITO was launched using:
RESULT:
Template:
1DI6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93011 for 1324 contacts (-70.2/contact) +
2D Compatibility (PS) -17309 + (NN) -2201 + (LL) 884
1D Compatibility (HY) -15600 + (ID) 4150
Total energy: -131387.0 ( -99.23 by residue)
QMean score : 0.420
(partial model without unconserved sides chains):
PDB file :
Tito_1DI6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DI6-query.scw
PDB file :
Tito_Scwrl_1DI6.pdb
: