Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLINEKLNNLENSATKSPKEAVVLLNMGGPNSLYEVGVFLKNMFDDPFILTIKNNFMRKMVGKMIVNSRIEKSKKIYEKLGGKSPLTPITFALTERLNELDPSR-------FYTYAMRYTPPYASMVLQDLALKEIESLVFFSMYPQYSSTTTLSSFNDAFNALKSLETF-RPKVRVIERFYADKKLNEIILNTILSALNNC---KSQDFVLIFSVHGLPKSIVDAGDTYQQECEHHVSLLKELMQQKNIPFKEVLLSYQSKLG-PMKWLEPSTEELIEKHRKS---NIIIYPLAFTIDNSETLYELDMQY-RLMAERLAVKEYLVCPCLNDSIEFAKFIIELVKNLKSE-------------------------------- |
| 1HRK Chain:A ((1-359)) | ----------------RKPKTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLP---IQNKLAPFIAKRLTPKIQEQYRRIGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGLERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTIDRWPTHHLLIQCFADHILKELDHFPLEKRSEVVILFSAHSLPMSVVNRGDPYPQEVSATVQKVMERLEYCN----PYRLVWQSKV-GPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIETLYELDIEYSQVLAKECGVENIRRAESLNGNPLFSKALADLVHSHIQSNELCSKQLTLSCPLCVNPVCRETKSFFTSQQL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HRK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -189187 for 2603 contacts (-72.7/contact) +
2D Compatibility (PS) -33434 + (NN) -15977 + (LL) 1040
1D Compatibility (HY) -22800 + (ID) 5000
Total energy: -265358.0 ( -101.94 by residue)
QMean score : 0.493
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