Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKNKVLGRGLADIFPEINEVYEQGLYERANRVVELGIDEVMPNPYQPRKIFSEDSLEELAQSIKEHGLLQPVLVVSENGRYHLIAGERRLRASKLAKMPTIKAIVVDIEQEKMREVALIENIQREDLNPLELARSYKELLESYQM-TQEELSKIVKKSRAHVANIMRLLTLSSKVQNALLEEKITSGHAKVLVGLEEEKQELILNSIIGQKLSVRQTEDLARDFKINANFDNKKHGFKQTQTLIAEDELERFNQSLWDRYKLKAALKGKKIVLRCYKNSLLEAFMKKMMS |
| 4D10 Chain:G ((12-219)) | ------TGQNQEQFLLLAKSAKGAALATLIHQVLE------APGVYVFGELLDMPNVRELAES--DFASTFRLLTVFAYGTYADYLAEAR-------NLPPLT----EAQKNKLRHLSVVTLAAKVKCIP------YAVLLEALALRNVRQLEDLVIEAVY----------------------------ADVLRGSLDQRN---------QRLEVDYS--IGRDIQ-------------RQDLSAIARTLQEWCVGCEVVLSGIEEQVSRANQHKEQQLGLKQQIESEVAN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4D10.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -19542 for 1372 contacts (-14.2/contact) +
2D Compatibility (PS) -22038 + (NN) -10576 + (LL) 7144
1D Compatibility (HY) -6000 + (ID) 1850
Total energy: -52862.0 ( -38.53 by residue)
QMean score : 0.338
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