Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVIRLTRIGRKKKPFYRVVVTDSRKRRDGGWIESIGYYNPLSEPKDVRIDKERLNYWKGVGAKMSERVEKLSQKA
3BN0 Chain:A ((2-76))
AVRIRLAKFGRKHHPIYRIVVMDAK------YIDILGTYDPKRKV-LINVYPEKVKEWVLKGVELSHRAKAILWNH
General information:
TITO was launched using:
RESULT:
Template:
3BN0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23975 for 458 contacts (-52.3/contact) +
2D Compatibility (PS) -7108 + (NN) -1875 + (LL) -92
1D Compatibility (HY) -4400 + (ID) 1050
Total energy: -38500.0 ( -84.06 by residue)
QMean score : 0.710
(partial model without unconserved sides chains):
PDB file :
Tito_3BN0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BN0-query.scw
PDB file :
Tito_Scwrl_3BN0.pdb
: