Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLEIDNQTPLESDFLLLEKIADVLASTQIIELVLVSDETMREINRDLRDCDYATDVLSFPLEAIPHTPLGSVVINAP-LAQENALKLGHSLEDEIALLFIHGVLHLLGYDHEKDKGEQRQKEGELIKAFDLPLSLIERTQEC
2L8K Chain:A ((1-123))
GLTATLAALTDDDFQFLSDVLDCR--------AVRSAMNLRAALTSFQVAQYRNILNASLQVDRDAARSRRLMAKLADFAVEQEVTAG----DRVVVIDGLDRMAHFKDDLVLVPLTTKVVGGS-------RCTICDVVKEE
General information:
TITO was launched using:
RESULT:
Template:
2L8K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16043 for 855 contacts (-18.8/contact) +
2D Compatibility (PS) -12100 + (NN) 6274 + (LL) 2092
1D Compatibility (HY) -400 + (ID) 750
Total energy: -20927.0 ( -24.48 by residue)
QMean score : 0.169
(partial model without unconserved sides chains):
PDB file :
Tito_2L8K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L8K-query.scw
PDB file :
Tito_Scwrl_2L8K.pdb
: