Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MAKIELLAKFTQIALPNSHPLLKKVLNYAKKHFSQCHMLSSSLLILNDTECFKKNYLLNWVYHALECAHEKDISMHSLEEILQKSHLPIRIKIMAQNTLLEKIEVKVLTFGAEYALFITKHPIAKRFLRQKFSGCVFLETQDELHIRGDSERFWELIVTLNENR----IVHNACLDFIYPNGFGKDSYTTMAERKLKEC---------------YKALGFIKHENFSEVKKRYLELAKTYHPDLCDLKEKKALYAKRFAIIQEAYSHIKKHA----- |
| 4F3V Chain:A ((1-275)) | GHMTDRLASLFESAVSMLPMSEARSLDLFTEITNYDESACDAWIGRIRCGDTDRVTLFRAWYSRRNFGQLSGSVQISMSTLNARIAIGGLYGDITYPVTS-----PLAITMGFAACEAAQGNYADAMEALEAAPVAGSEHLVAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNESAAVALLEWLQTTHPEPKVAAALKDPSYRLKTTTAEQIASRADPWDPGSVV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4F3V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56124 for 2013 contacts (-27.9/contact) +
2D Compatibility (PS) -25938 + (NN) -11546 + (LL) 572
1D Compatibility (HY) 9200 + (ID) 1800
Total energy: -85636.0 ( -42.54 by residue)
QMean score : 0.294
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