Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGFLFEKSLMGFCAHSIKIIKVTGLILSFLAAFLVAEDTHEPEEIKAKVAYVKIPQLEDLENTPVYIGQTIGVTYDLLLFDAEFLEAKIKDGWDKTQIELLNKMPKWKKVEKELFRATYYYKIKGIRASIPSLEVSAFSNKDKYIDHSI-APKVALQVTDLSKNPRYANVMAKDLQVVQYKTKDYDDKNNILVMELAFKEANWEDFHVKEAIKQGFDNASLNQIKAKEGSVFYYCVLPKTLQNLSFDYFSLSNRQFKTLSFSAIPTQDTTGIQSDLIPKNNFLVFSNVALLALCVFFLALFFIFGRKLIFLGLGILCLGFVLYNLLFTQKSALLLAHKKIRILPTQNSTILGLSR--DEMPIKILGSHDDYYKILTPHEQIGWVKKDEVK |
| 2C3F Chain:A ((28-357)) | LRVQFKRMKAAEWARSDVILLESEIGFETDTGFARAGDGHNR---FSDLGYISPLDYNLLTNKP---------NIDGLATKVETAQKLQQKA---------DKETVYTKAESKQELDKKLNLKGGVMTGQLKFKPATGGAVNIDLSSTRGAGVVVYSDNDTSDGPLMSLRTGKETFNQSALFVDYKGTTNAV--NIAMRQPTTPNFSSALNITSGNENGSAMQLRGSEKALG---TLKITHENPSIG--ADYDKNAAALSIDIVKKTNGAGTAAQGIYINSTS-----------------------------------GTTGKLLRIRNLS-----DDKFYVKSDGGFYAKETSQIDGNLKLKDPTANDHAATKAYVDKAISELKKLILK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2C3F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10532 for 1264 contacts (-8.3/contact) +
2D Compatibility (PS) -32510 + (NN) 5149 + (LL) 7736
1D Compatibility (HY) 8800 + (ID) 2800
Total energy: -24157.0 ( -19.11 by residue)
QMean score : 0.084
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