Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------MIFSKLIGLFSHDIAIDLGTANTIVLVKGQGIIINEPSIVAVRMGLFDSKAYDILAVGSEAKEMLGKTPNS------IRAIRPMKDGVIADYDITAKMIRYFIEKAHKRKTWIRPRIMVCVPYGLTSVERNAVKESALSAGAREVFLIEEPMAAAIGAGLPVKEP--QGSLIVDIGGGTTEIGVISLGG-------LVISKSIRVAGDKLDQSIVEYIRKKFNLLIG-------------ERTGEEIKIEIGCAIKLDPPLTMEVSG------------RDQVSGLLHTIELSSDDVFEAIKDQV-REISSALRSVLEEVKPDLVRDIVQNGVVLTGGGALIKGLDKYLSDMV-KLPVYVGDEPLLAVAKGTGEAIQDLDLLSRVGFSE |
| 1DKG Chain:D ((3-383)) | KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQD--------GETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEV--KG--QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDK--TGNRTIAVYDLGGGTFDISIIEIDEKTFEVLA--TNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELS-S-------------AQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVN-RSIELLKVALQDAG--LSVSDI-DDVILVGGQTRMPMVQKKVAEFFG-KEPRKDVNPDEAVAIGAAVQGGVLT--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DKG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -152228 for 2339 contacts (-65.1/contact) +
2D Compatibility (PS) -31665 + (NN) -5781 + (LL) 2680
1D Compatibility (HY) -2000 + (ID) 3050
Total energy: -192044.0 ( -82.11 by residue)
QMean score : 0.342
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