Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFEKIRKILADIEDSQNEIEMLLKLANLSLGDFIEIKRGSMDMPKGVNEAFFTQLSEEVERLKELINALNKIKKGLLVF
3SJA Chain:C ((1-61))
----MNELSKKYLAKVKERHELKEFNN--------------SISAQDNYAKWTKNNRKLDSLDKEINNLKDEIQSENHH
General information:
TITO was launched using:
RESULT:
Template:
3SJA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7380 for 323 contacts (-22.8/contact) +
2D Compatibility (PS) -6876 + (NN) -6751 + (LL) 1400
1D Compatibility (HY) 800 + (ID) 500
Total energy: -19307.0 ( -59.77 by residue)
QMean score : 0.801
(partial model without unconserved sides chains):
PDB file :
Tito_3SJA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SJA-query.scw
PDB file :
Tito_Scwrl_3SJA.pdb
: