Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LYQMKNKLQVKIPGKLYVAGEYAVVESGHTAILTAVNRYI-TLTLEDSERNELWIPHYENPVSWPVGGELKPDGEHWTFTAEAINIATTFLKSEGIELTPVKMIIETELIDQSGAKYGLGSSAAATVAVINALMTKFYPEISMLKKFKLAALSHLVVQGNGSCGDIASCMYGGWIAYTTFDQEWVKHRLAYKSLEWFMKEPWPMLQIETLEEPVPTFSVGWTGTPVSTGKLVSQIHAFKQEDSKNYQHFLTRNNEIMKQIIQAFHTKDEELLYSAIKENRRILQELGTKAGVNIETSLLKELADSAENMGGAGKSSGSGGGDCGIAFSKTKELAEKLVNEWEKLGIKHLPFHTGRVQITE |
1FWK Chain:A ((1-296)) | -----------MKVRVKAPCTSANLGVGFDVFGLCLKEPYDVIEVEAIDDKEIIIEVD--------DKNIPTDPDKNVAGIVAKKMIDDFNIGKGVKITIKKGV---------KAGSGLGSSAASSAGTAYAINELFKLNLDKLKLVDYASYGELASSGAKHADNVAPAIFGGFTMVTNYEPLEVLHIPIDFKLDILIAIPNISINTKEAREILP---------------------------KAVGLKDLVNNVGKACGMVYALYNKDKSLFGRYMMSDKVIEPVRGKLI------PNYFKIKEEVKDKVYGITISGSGPSIIAFPKEEFIDEVENILRDYYENTIRTEVGKGVEVV--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1FWK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -115722 for 2675 contacts (-43.3/contact) +
2D Compatibility (PS) -31570 + (NN) -10187 + (LL) 4400
1D Compatibility (HY) -4000 + (ID) 2550
Total energy: -159629.0 ( -59.67 by residue)
QMean score : 0.340
|
|
|