Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSGYFQKRMLKYPLYGLIAATIILSVITFFFSWWLSALVVVGGIILTVAMFYFEYRLNEDVQLYVSNLTYRIKRSEEEALVEMPMGILLYDEHYKIEWVNPFMSKYFDKAELIGESLEEVGPEFLDVITGNDEKGIMSIAWRDHRFDTIVKRKERILYLYDRTEYYDLNKKFQANKSVFAVIFLDNYDEWAQGMDDRRRSALNNLVTSMLTNWAREHRIYLKRISTDRFMAFLTEEMLKRLEEEKFQILDRIRERTSKQNIPLTLSIGIGYKEDDLIQLADLAQSSLDLALGRGGDQVVIKQPEGKVRFYGGKTNPMEKRTRVRARVISQALQELITQSDQVFVMGHRYPDMDVIGSSLGVMRIAEMNDRNAYVV-VEPGKMSPDVKRLMNEIEEYPNVIKNIVTPQVALENITEKSLLVVVDTHKPSMVINKELLDSATNVVVVDHHRRSEEFVGSPVLVYIEPYASSTAELITELFEYQPDLEQVGKIEATALLSGIVVDTKNFTLRTGSRTFDAASYLRSLGADTILVQQFLKEDITTFTQRSRLVESLEIYHDGMAIATGHEDEEFGTVIAAQAADTMLSMEGVQASFVITLRPDKLIGISARSLGQINVQVIMEKLGGGGHLSNAATQLKDVTIAEAEKQLISAIDAYWKGET |
| 4K70 Chain:A ((2-483)) | -PGSMEALVRALEEADHAVATVVQSRILEFFM-------AAGRETPAGVRGLWARALRLACRAYVETGT-----CEAAVLAENLAGLALWR-----------LRHDWDEGT-------APLLELLGVVNGDDTTAALTEA------------------------------GLRTSAEFGPDAMFRLVSEWCAAFDEALAGARS----------ADDVLAAPRVVPPEQTARALVQPRFATLYDMDF-VQDGLRYVAQHTNWALPLALAVRQMQNE--GLKPLTRALFALTIADEF-------------FHDRQNPTLREQFAEAARAVDEAALVPVGEVNAT------------PRTAVEVRVSAALAHGDAYVRELRPGT-----------------VARRLRTDQGVLALLDPGAQAVHVAAAAD--------LDH-TQVDATGVWEAVQA-------------SASPLQVVEALVTAGFTRRHCDLLERAVL----------------DRAPRLTDAQRAVGC-TAVVGGVVHRLLDDYGPGLDYVRAYTDVADTLEPLYGDVTAALG-----------LPEKGVEHVVRHCMAPRPPTEHVGAARAALLREVAAAERRAGLAHSAAREALNTWLAFRAQSRWGL---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K70.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -106686 for 4212 contacts (-25.3/contact) +
2D Compatibility (PS) -49879 + (NN) -5322 + (LL) 14336
1D Compatibility (HY) -5600 + (ID) 4200
Total energy: -157351.0 ( -37.36 by residue)
QMean score : 0.243
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