Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence------------------VITNQRDIDKYY-------DMLVEKNSNY---------EGVFFVGVKTTGILCR--PTCPAKKPLKENCEFFST--AKEALLASYRP----CKRCEPLSNPTKLSPAVKLLVDAIE-----------KNPEKKW-------TDKDFDDL---SISANTARRQF----KKQFGMTFIEYARSRRLGLAFKHIRGGN--SIINAQLDSGYESGNGFRDAFSKTMGEVPHKSKDITILYSAWLETKLGSMLAISDDDSLLLLEFVDRKGLETEIKKLRM-RLNAAITPEKTIIIQQIEAELAQYFNGE-----------LIDFKTP---IRYIGSDFQENVWEELRRIP--IGETISYKG----------LAEKLGRSTASRAVARANGANQL--------SLIVPCHRVINTNGALGGYGGGLARKEWLIKHEKMVPK-----------------------------
4U1F Chain:A ((17-496))PSSSLKSWLMDDKVRDQFVLQDDVKTSVFWNSMFNEEDSLVESRENWSTNYVRFSPKGTYLFSYHQQGVTAWGGPNFDRLRRFYHPDVRNSSVSPNEKYLVTFSTEPIIVEEDNEFSPFTKKNEGHQLCIWDIASGLLMATFPVIKSPYLKWPLVRWSYNDKYCARMVGDSLIVHDATKNFMPLEAKALKPSGIRDFSFAPEGVKLQPFRNGDEPSVLLAYWTP--ETNN---SACTATIAEVPRGRVLKTVNLVQVSNVTLHWQ---NQAEFLCFNVERHTKSGKTQFSNLQICRLTERDIPVEKVELKDSVFEFGWEPHGNRFVTISVHEVADMNYAIPANTIRFYAPE-TKKRWSLVKEIPKTFANTVSWSPAGRFVVVGALVGPNMRRSDLQFYDMDYPGEKNINDNNDVSASLKDVAHPTYSAATNITWDPSGRYVTAWSSSLKHKVEHGYKIFNIAGNLVKEDIIAGFKNFAWRPRP


General information:
TITO was launched using:
RESULT:

Template: 4U1F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 15792 for 2132 contacts (7.4/contact) +
2D Compatibility (PS) -34641 + (NN) 4478 + (LL) 636
1D Compatibility (HY) -12800 + (ID) 3400
Total energy: -29935.0 ( -14.04 by residue)
QMean score : 0.127

(partial model without unconserved sides chains):
PDB file : Tito_4U1F.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4U1F-query.scw
PDB file : Tito_Scwrl_4U1F.pdb: