Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LDKKAIFDSVSNMEEQIGELYQQLGDLKTNLGEMLEENNRLNLENEHLRRRLSLTDEATPEPKAETEAEHGVMAPNRKEAMQQMIELGEGYDNLVQLYKEGFHVCNVHFGSPRGNDEDCLFCLSLLNKK
2QA7 Chain:A ((371-469))
----------DEKDHLIERLYREISGLKAQLENMKTESQRVVLQLKGHVSELEADLAEQQHLRQQAADDCEFLRAELDELRRQREDTEKAQRSLSEIERKA--------------------QANEQRYS
General information:
TITO was launched using:
RESULT:
Template:
2QA7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 12746 for 400 contacts (31.9/contact) +
2D Compatibility (PS) -10905 + (NN) -5552 + (LL) 1332
1D Compatibility (HY) 400 + (ID) 700
Total energy: -2679.0 ( -6.70 by residue)
QMean score : 0.413
(partial model without unconserved sides chains):
PDB file :
Tito_2QA7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QA7-query.scw
PDB file :
Tito_Scwrl_2QA7.pdb
: