Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKDIATPGRTTEILKKYGFLFKKSLGQNFLIDSNILTRITDTAEITKETNVIEIGPGIGALTEQLAKTANEVVAFEIDQRLLPILDDTLSA--YNNVKVVHGDVLKADVEEVIAEQFAKPELPLKIVANLPYYVTTPIILKLLHDNIPADSMTFMLQKEVADRISAVPSTKSYGSLTIAIQFYMEAELAFIVPKTVFMPQPNVDSAVIHLKRRKEPLAEVNDEEFFFEVTRASFAQRRKTLWNNLASKFPALKP---------------------RKDELVEGLNAIGIDLIRRGETLDIPEFAKLSNFLGDFLKEK |
2H1R Chain:A ((2-272)) | ----------------------------HLLKNPGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEVKKRCLYEGYNNLEV----AIKTVFP-----------KFDVCTANIPYKISSPLIFKLISHRPLFKCAVLMFQKEFAERMLANVGDSNYSRLTINVKLFCKVTKVCNVNRSSFNPPPKVDSVIVKLIPKESSF--LTNFDEWDNLLRICFSRKRKTLHAIFKRNAV--LNMLEHNYKNWCTLNKQVPVNFPFKKYCLDVLEHLDM-CEKRSINLDENDFLKLLLEFNKKG--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2H1R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -151601 for 1875 contacts (-80.9/contact) +
2D Compatibility (PS) -25668 + (NN) -3108 + (LL) 3540
1D Compatibility (HY) -18000 + (ID) 3300
Total energy: -198137.0 ( -105.67 by residue)
QMean score : 0.489
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