Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNISDIIEAYLKQVLESSEAVEIKRSEIADKFECVPSQINYVINTRFTMERGYIVESKRGGGGYIRIIKVKMNDKLQLLEAIISMVHDKKVSQSFSEDVILRLLEEEVITKKEARLMVAALDREVLILPLPDRDILRSRILEAMLVALKYD
4TYZ Chain:A ((1-109))
--NIEGVFRKSFPDLAGET----------------LLDSFNCAWVEGSALKQGYLFITPH----WLCFQSTLAAAHFSIEYDEIKDIIKSKSVKMFENAIEVKT----------------HLNDTIFLTNFLQRDQAYSALMSQWLK-----
General information:
TITO was launched using:
RESULT:
Template:
4TYZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61846 for 752 contacts (-82.2/contact) +
2D Compatibility (PS) -11382 + (NN) 990 + (LL) 3732
1D Compatibility (HY) -6000 + (ID) 650
Total energy: -75156.0 ( -99.94 by residue)
QMean score : 0.535
(partial model without unconserved sides chains):
PDB file :
Tito_4TYZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4TYZ-query.scw
PDB file :
Tito_Scwrl_4TYZ.pdb
: