Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VDNSVNQEELAMLELARSGDTEALEYFFSKY---QSVIYWKSTQYFLQGAERDDLIQEAMIGLFKAIRDYDKTKEASFRSFAEMCI--NRQLLSAVKRAS-----RQKNIPLNNSVSLDTPMAEDDVDWTLLDVISEKAAETPEDFLIKNEDLTHVARQLEQVTSEFEKEVLKQYLEGKSYQEMALFFNKKEKAIDNALQRVKKKMMKQLE |
1D02 Chain:A ((6-202)) | LSGRLNWQALAGLKA--SGAEQNLYNVFNAVFEGTKYVLYEKPKHLKNLYAQVVLPDDVIKEIFNPLIDLSTTQWGVSPAFAIENTETHKILFGEIKRQDGWVEGKDPSAGRGNAHERSCKLFTPGLLKAYRTIGGINDEEILPFWVVFEGDITRDPKRVREITFWYDH-----------YQDN-YFMWRPNESGEKLVQHFNEKLKKYLD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1D02.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11576 for 1305 contacts (-8.9/contact) +
2D Compatibility (PS) -19454 + (NN) -6078 + (LL) 1280
1D Compatibility (HY) -8000 + (ID) 1450
Total energy: -45278.0 ( -34.70 by residue)
QMean score : 0.235
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