Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYQSITANDLEQDLK--KVPHNILDVRDADAFVEGHIPDAINIPINELPEKLA-TLDKEKAYTIICYAG--GRSERASQFLAAEGFDVTNVMGGMGAFHGTVTN
3NHV Chain:A ((16-116))
--YETDIADLSIDIKKGYEGIIVVDVRDAEAYKECHIPTAISIPGNKINEDTTKRLSKEKVIITYCWGPACNGATKAAAKFAQLGFRVKELIGGIEYWRKENG-
General information:
TITO was launched using:
RESULT:
Template:
3NHV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60331 for 727 contacts (-83.0/contact) +
2D Compatibility (PS) -10643 + (NN) -4382 + (LL) 220
1D Compatibility (HY) -5600 + (ID) 1600
Total energy: -82336.0 ( -113.25 by residue)
QMean score : 0.557
(partial model without unconserved sides chains):
PDB file :
Tito_3NHV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NHV-query.scw
PDB file :
Tito_Scwrl_3NHV.pdb
: