Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------------------------------------MAYPIKYI---ENNLVFNNDGECFAYYELIPYNYS----FLSPDEKYQVHDNFRQLVAQSRDGKIHALQLATE-SSIRATQERSKLEVKGRLKEVA--HRKIDE-------QTEALVSMIGDNQVDYRFFIGFKLLLN-------EQELSIQSVSQEIKKAVQEF-LNGVNHKLMGDFVSMSNAEIDRFSKMENLLES---KISRRFKI---RKLDKNDFGYIIEHIYGQTGTPYEE-----YEYHLPKKYQDKEVLVKKYDILKPTR--------CLIDESQRYLKIIHEDETTY-VAYFT--------------INSIVGEL--DFPSSEIFYYQQQQFTFPID-----TSMNVEIVANKKALTTVRNKKKELKDLDSHAWESDNETSNNVIDALDSVNEL---ETTLDQSKESMYKLSYVVRVSAKDLDELKRRCD-----EVKDFYDDLSIKLVRPFGDMLGLHGEFIPASKRYINDYIQYVTSDFLAGLGFGATQTLGE------HEGIYVGYNLDTGKNVYLKPALASQGVKGSVTNALASAFIGSLGGG---KSFSNNMLVYYAVLFGGQAVIV--------DPKAERGKWKETLPEIAHEINIVNLTSDDENKGLLDPYVILSRKKDSESLAIDILTFLTGISSRDSDKFPVLRKAIRNVTQSEQRGLL-----------LVIDELRKEDTSISNSIADHIESFVDYDFAHLL-FSDGNVTQSISLEKQLNIIQVADLVLPDADTSFEEY-TTMELLSVAMLIVISTFALDFIHTDRSIFKIVDLDEAWSFLQVAQGKTLSMKLVRAGRAMNAGVYFVTQ------NADDLLDEKMKNNIGLKFAFRST----DLVEIKKTLTFFGVDPEDENNQKRLRELENG----------------QCLISDLYGRVGVMQFHPIFEELLQAFDTRPPIRNEVE------------------------------------------------------------------------------------------------------------------------- |
| 3U4Q Chain:B ((2-1160)) | GAEFLVGRSGSGKTKLIINSIQDELRRAPFGKPIIFLVPDQMTFLMEYELAKTPDMGGMIRAQVFSFSRLAWRVLQHTGGMSRPFLTSTGVQMLLRKLIEEHKQEFKVYQKASDKSGFTAQVERMLTEFKRYCLEPEDIRRMAESGTASEYRGERVLSEKLHDLSILYQQMEKSLADQYLHSEDYLTLLAEHIPLAEDIKGAHIYVDGFYQFTPQEFRVLEQLMVHAEHITFSLTADKPSYEREPHELELFRMTGKTYYRLHQKAKELNLDITYKELSGTERHTKTPELAHLEAQYEARPAIPYAEKQEALTVMQAANRRAELEGIAREIHALVREKGYRYKDVAILARQPEDYKDMVKEVFADYEIPYFIDGKASMLNHPLIEFIRSSLDVLKGNWRYEAVFRCVKTELLFPLNEPKAKVREQVDQLENYCIAYGIKGDRWTKTDQEIEMENMLNDTRDWIVPPLFQLQKRMKKAKTVQEKAEALYRYLEETDVPLK-LDQERQRAEDDGRIIEAQQHQQAWDAVIQLLEEFVEMMGDDEISLDLFQQMIEAGAESLTFSLIPPALDQVFVGNMDLSRMYGTSCTFVLGANDGV-LPARPDENGVLSDDDREWLKTIGVELSSGGRERLLDEHFLIYMAFSSPSDRLYVSYPIADAEGKTLLPSMIVKRLEELFPHHKERLLTNEPEQVSDEEQLMYVVNKSVAQSFTASQLRLWTREYDISDVWWSTYNVLMSEQDRLQSKKLFSSLFFRNEVKQLERSVSRQLYGERIQGSVSRMETFNACPFSHFASHGLHLKERQFFKLEAPDIGQLFHSSLKLISDRLRDEKLDWRDLTKEQCELFSYDAVERLAPKLQ-KEILLSSNRHYYVKEKLQKIVTRVSGILSEHAKASGFVPIGLELGFGGKGPLPPLTFQLKNGCTMELVGRIDRVDKAESSKGLLLRIVAYKSSDKGLDLAEVYYGLALQMLTYLDLSITHSADWLGMRATPAGVLYFH-IHDPMIQSNLPLGLDEIEQEIFKKFKMKGLLLGDQEVVRLMDTTLQEGRSNIINAGLKKDGSLRSDSAAVGEKEFDLLTKHVRRTFQEAGEQITDGRVSIEPYKCAFKSVCQFDESLEENEYRPLKAEKDKTILEWIKKEA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3U4Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -52743 for 5505 contacts (-9.6/contact) +
2D Compatibility (PS) -85670 + (NN) -10389 + (LL) 80
1D Compatibility (HY) -14000 + (ID) 5100
Total energy: -167822.0 ( -30.49 by residue)
QMean score : 0.185
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