Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEFKHEVENNFANIIQEYRFNLIKVNEDEIMLLNPNYALTIWKSREGIDIYYLFLHSLEKVKITNFLFSNYEKDLLANITPANNLTDQISNS-LLIHARGLSKYFPELLSGQNDWVKEFKENKFYNEPRAINKDEYSAYQTIIKNINGKKIEGFQNEI |
2VMJ Chain:A ((211-262)) | ---------------------------------------------------------------------------VGALTGANALTAKVGETVLLIHSQANRDTRPHLIGGHGDWV--WETGKFANPPQ----------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VMJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2133 for 175 contacts (12.2/contact) +
2D Compatibility (PS) -5159 + (NN) 32 + (LL) 8480
1D Compatibility (HY) -3600 + (ID) 950
Total energy: 936.0 ( 5.35 by residue)
QMean score : 0.218
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