Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------MELTKENFQKLDLIHLSLENRHSMSEIIDILSESYIEITQSGV------VKDYAYYKSLT-TLGDSNLAIMEYDVKILDETKVLS-YYKLKNLSENNYTMRSNIWIFENGSWKLTFHQ-GTRII------------------------------------------------------------------------------------------------------------------------------ |
| 3U4T Chain:A ((230-487)) | VEFRYADFLFKNNNYAEAIEVFNKLEAKKYNSPYIYNRRAVCYYELAK--YDLAQKDIETYFSKVNATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNK------------GNFPLAIQYMEKQIRPTTTDPKVFYELGQAYYYNKEYVKADSSFVKVLELKPNIYIGYLWRARANAAQDPDTKQGLAKPYYEKLIEVCAPGGAKYKDELIEANEYIAYYYTINRDKVKADAAWKNILALDPTNKKAIDGLK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3U4T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 12451 for 651 contacts (19.1/contact) +
2D Compatibility (PS) -10340 + (NN) -2803 + (LL) 1472
1D Compatibility (HY) 1200 + (ID) 700
Total energy: 1280.0 ( 1.97 by residue)
QMean score : 0.116
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