Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceLEKYVVIGNPIRHSLSPAMQNRIFQELGMNAEYNSVLIEEDAFETEIKKLMDSGVRGFNITTPFKERILPFLDELDNLAAASGAVNTVLKKED--KWYGFNTDGKGYLEGLEE-IRSITEDDSILITGAGGASKAIYL-----------ALSTHTDAKITVANRTTEKAIEMTK--------DNNNHHAITLEEAEKQLADFTIIIQTTSIGLEASKNKSPISLANVKQGTICSDIIYNPAETAFLKEAKKNGAITQNGLPMFVNQGALAFEIWTGIKPERSLMKEAVLEQLGGN
2GPT Chain:A ((237-506))---YGIIGKPVSHSKSPIVHNQAFKSVDFNGVYVHLLV--DNLVSFLQAYSSSDFAGFSCTIPHKEAALQCCDEVDPLAKSIGAVNTILRRKSDGKLLGYNTDCIGSISAIEDGL-------------------TVVVIGAGGAGKALAYGAKEKGAKVVIANRTYER--ELAEAIGALSLTDLDNY------------EDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRITRLLREAEESGAITVSGSEMFVRQAYEQFEIFTGLPAPKEL------------


General information:
TITO was launched using:
RESULT:

Template: 2GPT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89495 for 1795 contacts (-49.9/contact) +
2D Compatibility (PS) -23634 + (NN) -7546 + (LL) 3896
1D Compatibility (HY) -18000 + (ID) 4050
Total energy: -138829.0 ( -77.34 by residue)
QMean score : 0.453

(partial model without unconserved sides chains):
PDB file : Tito_2GPT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2GPT-query.scw
PDB file : Tito_Scwrl_2GPT.pdb: