Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGLTKIEIITRPNRFHLFQKELAKIGVSGLTVTKALGTGLEKGFIELYRGTKKESNIHERMKIEIVVSTVPVEDVLRVVKETLRTGEPGDGKVFIYPLAEVVKISTGETGIDALQDKPSK
2XZW Chain:F ((1-112))
---MKKIEAIIRPFKLDEVKIALVNAGIVGMTVSEVRGFGRQKGQTERY-----TVEFLQKLKLEIVVEDAQVDTVIDKIVAAARTGEIGDGKIFVSPVDQTIRIRTGEKNADAI------
General information:
TITO was launched using:
RESULT:
Template:
2XZW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54569 for 697 contacts (-78.3/contact) +
2D Compatibility (PS) -11802 + (NN) -5769 + (LL) 120
1D Compatibility (HY) -5200 + (ID) 2000
Total energy: -79220.0 ( -113.66 by residue)
QMean score : 0.599
(partial model without unconserved sides chains):
PDB file :
Tito_2XZW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XZW-query.scw
PDB file :
Tito_Scwrl_2XZW.pdb
: