Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNRLAVEIPGLSLKNPIMPASGCFGFGQEYSKYYDLNELGAIMAKAVTPEPRLGNPTPRVAETASGMLNAIGLQNPGLEHVLAHELPFLE--QFETPIIANVAGATEDDYVQVCARIGESKAV-KAIELNISCPNVKHGGIAFGTDPEVAHRLTKAVKNVASVPVYVKLSPNVA--DIVSIAQAIEAAGADGLTMINTL-LGMRIDLKTRKPII--ANGTGGLSGPAIKPVAIRMIHQVRAVS--NIPIIGMGGVQTVDDVLEFLIAGADAVAVGTMNFT-DPFICPKLISELPKRMDALGISSLQDLKKERTNQ |
| 1JUB Chain:A ((1-310)) | --MLNTTFANAKFANPFMNASGVHCMTIEDLEELKASQAGAYITKSSTLEKREGNPLPRYVDLELGSINSMGLPNLGFDYYLDYVLKNQKENAQEGPIFFSIAGMSAAENIAMLKKIQES-DFSGITELNLSCPNVPGE-PQLAYDFEATEKLLKEVFTFFTKPLGVKLPPYFDLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIGTGGIETGQDAFEHLLCGATMLQIGTALHKEGPAIFDRIIKELEEIMNQKGYQSIADFHGKLKS- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JUB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -183878 for 2638 contacts (-69.7/contact) +
2D Compatibility (PS) -32099 + (NN) -14139 + (LL) 140
1D Compatibility (HY) -14800 + (ID) 4500
Total energy: -249276.0 ( -94.49 by residue)
QMean score : 0.506
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