Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGDKIAVIPGTFDPITNGHLDIIERAAKIFDVLYVSVLNNSSKKPLFTIEERMEMIRQVTAHLPNVQVESASGLTVDYAATRGATAIVRGLRAVSDFEYEMQIASMNRTLNADIETFFVMTNTKYSFLSSSMVKEVAQYQGDISELVPEIVNKAVQAKFK
3L92 Chain:A ((8-161))
-----AIYPGTFDPITNGHLDLVTRASAMFSHVILAIADSSSKKPMFTLDERVALAKKVTAPLKNVEVLGFSELMAEFAKKHNANILVRGLRSVSDFEYEWQLANMNRHLMPKLESVFLIPSEKWSFISSSLVKEVARHGGDITPFLPKPVTKALLAKL-
General information:
TITO was launched using:
RESULT:
Template:
3L92.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -99536 for 1184 contacts (-84.1/contact) +
2D Compatibility (PS) -16753 + (NN) -7705 + (LL) 292
1D Compatibility (HY) -18000 + (ID) 3850
Total energy: -145552.0 ( -122.93 by residue)
QMean score : 0.525
(partial model without unconserved sides chains):
PDB file :
Tito_3L92.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3L92-query.scw
PDB file :
Tito_Scwrl_3L92.pdb
: