Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------MRVIAGERKGHALKAVPGNNTRPTTDKVKESLFSIIGPFFDGDMVLDLFAGSGGLGIEALSRGAERAVFIDQAALAIKTIRQNLEGCHFT-ERAEVYRNDAERALKLLHKNEWKFDLIFLDPPYKKQQLEKLIGT-------LEKLELVNENGRIICEHDKEAIMPDTIGKFEKIKSVSYGITVLSIFEFQEA----------------------- |
| 3LDF Chain:A ((1-385)) | MIKLMVGSFAEKKLKRGVQLLSSRDYPNLNLDNQVVQLYSDADIFLGTAYLSKQNKGVGWLISPKKVSLNVTYFIKLFQWSKDKRKNFAHSKLTTAYRLFNQDGDSFGGVTIDCYGDFVLFSWYNSFVYQIRDEIVAAFRQVYPNFLGAYEKIRFNVSAHLYGQEAPEQFLILENGISYNVFLNDGLMTGIFLDQ-RQVRNELINGSAAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIIIDPPSFARNKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANM---TVSQFKKQIEKGFGKQKHTYLDLQQLPSDFAVNVQDESSNYLKVFTIKV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LDF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41974 for 1350 contacts (-31.1/contact) +
2D Compatibility (PS) -19173 + (NN) -7295 + (LL) 184
1D Compatibility (HY) -4800 + (ID) 1850
Total energy: -74908.0 ( -55.49 by residue)
QMean score : 0.468
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