Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNWTIWDKSQKVPYTLLLEAD---PSEKQIAKYLDKSHVFQLMHDDIVIGIICLFPLNNDQLEIMNIAVSSDYRNQGIGKKLLEKAFDYAIHKHFIKIIVKTGNSSIDQLAFYQKNGFRMQHIIPNYFTENYPNQTITENGIVCLDQIILLKEIKS
3BLN Chain:A ((8-129))
----ASIDDLDSIVHIDIDVIGNDSRRNYIKHSIDEGRCVIVKEDNSISGFLTYDTNFFDCTFLSLIIVSPTKRRRGYASSLLSYMLSHSPT---QKIFSSTNESNESMQKVFNANGFIRSGIVENLDE---------------------------
General information:
TITO was launched using:
RESULT:
Template:
3BLN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70774 for 804 contacts (-88.0/contact) +
2D Compatibility (PS) -13223 + (NN) -8456 + (LL) 2592
1D Compatibility (HY) -2000 + (ID) 1050
Total energy: -92911.0 ( -115.56 by residue)
QMean score : 0.452
(partial model without unconserved sides chains):
PDB file :
Tito_3BLN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BLN-query.scw
PDB file :
Tito_Scwrl_3BLN.pdb
: