Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | --MKNYLSLSEEVKQAKAEGKAIVALESTIISHGMPYPQNVEMARDVEQIIRDNGAVPATIALIDGKIKIGLSDEELELFAKSSNVAKVSRRD------IGYLIATKQLGATTVAATMICAELAEIGIFVTGGIGGVHRGAETTMDVSADLEELAKTNVAVVCAGAKSILDLNLTMEYLETKGVPVIGYQTDVLPAFYTRSSDVELTL-RADTPEVIAESLKAKWDLQIEGGAVITNPIPEEFAMDEKVIN-DVIQTALKEAEENHIHGKDVTPFLLGKVKELTDGKSLEANIEL-----VKHNALIGTQIAVAYQNI |
4BVA Chain:A ((24-334)) | KRAPAFLSAEEVQDHLRSSSLLIPPLEAALANFSKGPDGGVMQPVRTVVPVAKHRGFLGVMPAYSAA-EDALTTKLVTFY--ESHQASVLLFDPSNGSLLAVMDGNVITAKRTAAVSAIATKLLKPPGSDVLCILGAGVQAYSHYEIFTEQFSF--KEVRMWNRTRENAEKFASTVQ----GDVRVCSSVQEAVT-----GADVIITVTMATEPILFGEWVKPGAHINAVGASRPDWRELDDELMRQAVLYVDSREAALKESGDVLLSGADI-FAELGEVISGAKPAHCEKTTVFKSLGMAVEDLVAAKLVYDSWSSG |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4BVA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -5200 for 2525 contacts (-2.1/contact) +
2D Compatibility (PS) -30249 + (NN) -7451 + (LL) 1616
1D Compatibility (HY) -2800 + (ID) 2200
Total energy: -46284.0 ( -18.33 by residue)
QMean score : 0.235
|
|
|