Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANVVVWSKEGCHYCKDVKDFLIEQKIVFQDIDVTDHDYLREVLQAKYGICHVPVVEIGNIENGTYQAVTEIGLEHLEKALFEKGEVK
1FOV Chain:A ((2-66))
--NVEIYTKETCPYCHRAKALLSSKGVSFQELPIDGNAAKREEMIKRSGRTTVPQIFIDAQHIGGYD---------------------
General information:
TITO was launched using:
RESULT:
Template:
1FOV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45847 for 429 contacts (-106.9/contact) +
2D Compatibility (PS) -7235 + (NN) -3295 + (LL) 2352
1D Compatibility (HY) -2000 + (ID) 950
Total energy: -56975.0 ( -132.81 by residue)
QMean score : 0.566
(partial model without unconserved sides chains):
PDB file :
Tito_1FOV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FOV-query.scw
PDB file :
Tito_Scwrl_1FOV.pdb
: