Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKKYGILALALTAALTLSACGGKEEPEAANQKVQTITVGTGTQFPNVCFLDENGKLTGYDVELVKEIDKRLPGYKFKFKTMDFSNLLVSLGAGKVDIVAHQMEKSKEREKKFLFNDVAYNNFPLQLTVLDSNNSINSTKDLAGKRVITSATSNGALVLKKINEEQGNNFEIAYEGQGSNDTANQLKTGRADATISTPFAVD-FQNKTSAIKEKVVGDVLSNAKVY-FMLGKDETKLSKKVDEALQSIIDDGTLKKLSEKWLGADYSKEQY |
3VV5 Chain:A ((31-257)) | -----------------------------EIKRSGEIRIGTEGAFPPFNYFDERNQLTGFEVDLGNAIAERLG-LKPRWIAQSFDTLLIQLNQGRFDFVIASHGITEERARAVDFTNPHYCTGGVIVSRKGG---PRTAKDLQGKVVGVQVGTTYMEAAQKIP---GI--KEVRTYQRDPDALQDLLAGRIDTWITDRFVAKEAIKERKLENTLQVGELV-FQERVAMAVAKGNKSLLDALNRALAELMQDGTYARISQKWFGEDV----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VV5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63335 for 1881 contacts (-33.7/contact) +
2D Compatibility (PS) -24076 + (NN) -6517 + (LL) 2636
1D Compatibility (HY) -10000 + (ID) 2900
Total energy: -104192.0 ( -55.39 by residue)
QMean score : 0.515
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