Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VVVTNIVKIIREKKGITQNELAHSLDVSRQTIHAIEKGKYN---PSLELSLKIAK-----FFDLPVEEIFNLEGE
4I6U Chain:A ((12-79))
--VSFVIKKIRLEKGMTQEDLAYKSNLDRTFISGIERNSRNLTIKSLELIMKGLEVSDVVFFEMLIKEIL-----
General information:
TITO was launched using:
RESULT:
Template:
4I6U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22543 for 384 contacts (-58.7/contact) +
2D Compatibility (PS) -6265 + (NN) -2251 + (LL) 516
1D Compatibility (HY) -5600 + (ID) 1200
Total energy: -37343.0 ( -97.25 by residue)
QMean score : 0.732
(partial model without unconserved sides chains):
PDB file :
Tito_4I6U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4I6U-query.scw
PDB file :
Tito_Scwrl_4I6U.pdb
: