Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGIAVLGGAGYIGSHAVDELITRGYEVVVIDNLRTGHRESIH-------KKAKFYEGDIRDKAFLSSVFEKEK-VDGVIHFAASSLVGESMEVPLDYLNNNVYGTQIVLEVMEEFDVKHIVFSSSAATYGE----PERVPITEDMPTNPESTYGETKLIMEKMM------------KWCDKAYGMKF--VALRYFNVAGAKADGSIGEDHKPES---HLVPIILQVALGQREKLAIYGDDYNTPDGTCIRDYVQVEDLIDAHIRALEYLK-NGGESNIFNLGSSNGFSVKEMLEAARTVTGKEIPAEVVPRRAGDPGTLIASSDKAREILGWEPTYTDVKDIIATAWKWHVSHPNGY
4LIS Chain:B ((6-357))--VLVTGGTGYIGSFTTLALLEAGYKVVVADNLYNSSAEALNRIELISGKKAEFAQLDVTDEAAFDKVFEAHPDIDSVIHFAALKAVGESGEKPLDYYHVNVYGTICLLRSMVRHNVTNIVFSSSATVYGDATRFPDMIPIPEHCPLGPTNPYGNTKFAIELAITDVINAQRNNAKKAGNETEAAKWNGALLRYFNPAGAHPSGIMGED--PQGVPYNLLPLLAQVATGKREKLLVFGDDYASHDGTAIRDYIHILDLADGHLKALNYLRANNPGVRAWNLGTGRGSTVYEMIRAFSKAVGRDLPYEVAPRRAGDVLNLTSNPTRANTELGWKAQRT-LEQACEDLWLWTKNNPQGY


General information:
TITO was launched using:
RESULT:

Template: 4LIS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -177650 for 2722 contacts (-65.3/contact) +
2D Compatibility (PS) -34644 + (NN) -13652 + (LL) 68
1D Compatibility (HY) -20000 + (ID) 7300
Total energy: -253178.0 ( -93.01 by residue)
QMean score : 0.603

(partial model without unconserved sides chains):
PDB file : Tito_4LIS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4LIS-query.scw
PDB file : Tito_Scwrl_4LIS.pdb: