Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VEAKLQVGVLGFGTVGSGVIHILEEHQEKISQVTGYNISVKKVLVRDLEKNRRYETKGFELTTNPSDVLDDPEIAVVVEVMGSITTAREYILQALKAGKHVVTANKDLIALHGDELVAVAQANNCDLFYEASVAGGIPILRTIVNSLAADKIQKVMGIVNGTTNFMLTKMTTEKKSYEDVLAEAQALGFAESDPTNDVDGIDAARKMVIMTRLAFGMNVNLDNVETNGIRGISPEDIEVAYQLGYKIKLVGTAEETNGTVNVNVGPVLLPKAHPLAGVNYENNAVFVTGAAVGETMFYGPGAGELPTATSVVSDLITVAKNSRLGTNGNAFNSYKHETKHTPKEQVFSKYYLRLTMDDKTGTFLKLTQIFAEAGVGFDKILQQPYDDFTATVVIVTHSTSQAQLEQAIARVKDEPEMQMLAKYSVVEG |
2EJW Chain:A ((1-331)) | -MEALKIALLGGGTVGSAFYNLVLERAEELSAF-GVVPRFLGVLVRDPRKPRAIPQELLR-----AEPFDLLEADLVVEAMGGVEAPLRLVLPALEAGIPLITANKALLAEAWESLRPFAEEGL--IYHEASVMAGTPALSFL-ETLRGSELLELHGILNGTTLYILQEME-KGRTYAEALLEAQRLGYAEADPTLDVEGIDAAHKLTLLARLLVDPGFPFAEVEAQGIARLTPEVLQKAEARGERVRLVASLFGEGGRWRAAVAPRRLPQDHPLARAR--GNALWVRARPLGEAFVTGPGAGGGATASGLFADLLRFLSGAPGHLPAPRARPPLEEGSPWPGV------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2EJW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -178574 for 2933 contacts (-60.9/contact) +
2D Compatibility (PS) -35818 + (NN) -9854 + (LL) 7956
1D Compatibility (HY) -22000 + (ID) 5600
Total energy: -243890.0 ( -83.15 by residue)
QMean score : 0.495
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