Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKAVGLTKAST--DFV-DIEIDKPVPENHDLLVKIKAISINPVDTKQREAAKLSGEEVRILGWDAVGEVVDTGSEVTLFQTGQDVYFAGDVTRPGVYAEYTLIDE-RLVGLKPHNLNVEEAAAMPL---TTITAWEALFDRLTITENDKGKSILIINGAGGVGSIATQLAANTGLEVIATASRSETVEWTKSHGANYVINHREN-IPEQLEELG-FKKGVDFILCLHNTSAHWDEMQEAIRPQGKICSIVELTEPV---EMTLLKDKSATFSYEFMFTRSKYDTADKIRQHEILTEAAHMLDKGNLTTTLNQVLSPVNAATIEEAHKIISSGKMIGKLVVKGFE |
| 3QWB Chain:A ((9-333)) | QKVILIDEIGGYDVIKYED-YPVPSISEEELLIKNKYTGVNYIESYFRKGIYP-CEKPYVLGREASGTVVAKGKGVTNFEVGDQVAYIS----NSTFAQYSKISSQGPVMKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVK---KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGK-GVDASFDS-VGKDTFEISLAALKRKGVFVSFGNASGLIPPFSITRLSPKNITLVRPQLYG-YI---ADPEEWKYYSDEFFGLVNSKKLNIKIYKTY-PL--RDYRTAAADIESRKTVGKLVLEIP- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QWB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161455 for 2699 contacts (-59.8/contact) +
2D Compatibility (PS) -33105 + (NN) -1681 + (LL) 708
1D Compatibility (HY) -11200 + (ID) 3950
Total energy: -210683.0 ( -78.06 by residue)
QMean score : 0.497
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